AI model study may lead to identifying skin cancer from blood test

October 7, 2022 - 3 minutes
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Researchers have developed an artificial intelligence (AI) model that predicts which skin cancer patients will benefit from a treatment that activates the immune defense system. 

The scientists are from the University of Helsinki, HUS Comprehensive Cancer Center, Aalto University and Stanford University.

In practice, the AI model makes it possible to diagnose skin cancer with a blood test, determine the prognosis and target therapies increasingly accurately.

The skin cancer–related study was published in the journal Nature Communications.

The right medication for the right patient

Boosting the body’s own defense system has proven to be a particularly effective therapy for skin cancer. The problem with therapies that activate the immune system are the differences between patient groups: while some patients can be said to be cured, others gain no benefit from the treatment at all.

“Prior research has been unable to provide doctors with tools that would predict who will benefit from treatment that activates the defense system. The correct targeting of therapies is extremely important, since drug therapies are expensive and serious adverse effects fairly common,” says doctor and doctoral researcher Jani Huuhtanen from the University of Helsinki and Aalto University.

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A complex AI model for a straightforward question

The international research group hypothesized that the immune cells of patients for whom the therapy was ineffective do not recognize skin cancer as an enemy, which is why the patients do not benefit from the treatment.

Using the AI model, the group analyzed samples from nearly 500 skin cancer patients and compared them with the samples of almost 1,000 healthy individuals. To aid interpretation, the researchers used another AI model developed by Mark M. Davis’ lab at Stanford University. From these samples, the researchers calculated the number of immune cells that recognized skin cancer.

As expected, more skin cancer–sensing defensive cells were found in patients with melanoma than in healthy patients.

“This finding may in the future make it possible to identify skin cancer from a blood sample,” says Professor of Translational Haematology Satu Mustjoki from the University of Helsinki.

In addition, skin cancer patients who had more defensive cells that recognized skin cancer were more likely to benefit from therapies that activate the immune system than those lacking such cells.

Focusing AI on other cancer types

The use of AI models in medicine has grown exponentially, but applying them in patient care requires long-term collaboration between doctors and researchers specializing in artificial intelligence.

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“In future studies, our aim is to explore the utilization of the AI model now developed and investigate whether it can predict treatment responses also for novel cancer drug therapies still in development,” said Associate Professor of Computational Biology and Machine Learning Harri Lähdesmäki from Aalto University.

“Our AI model is agile and adaptable, making it possible to calculate the number of cancer-sensing defensive cells also in the case of other cancers, including breast cancer, lung cancer and blood cancers,” Huuhtanen said.

“All of our research is based on open-source software, which makes our AI model available to other researchers and doctors, also enabling its further development.”

The study received funding from the European Research Council, Academy of Finland, Cancer Foundation Finland, the Sigrid Jusélius Foundation and the Gyllenberg Foundation. The study was carried out under the iCAN Digital Precision Cancer Medicine flagship platform funded by the Academy of Finland.

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